Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015930453.1_cds_XP_016477459.1_69188
CDS Infomation

[gene=LOC107798943] [db_xref=GeneID:107798943] [protein=transcription factor bHLH62-like isoform X2] [protein_id=XP_016477459.1] [location=join(23961..24686,24761..24970,25095..25160,25272..25340,25408..25479,25562..25753,26024..26137,26252..26275)] [gbkey=CDS]
Sequence

ATGGAGAAAGATTACTTCATGAATGGTGGAATTACTAATCCACCCCTCCAATTCGAACCC
ACTATGACTAACTGGAATTCCCTACATTCAGGGCAGTCTTCTGATTTTTTCCTTAACCCC
AATTGGGATCATGACTCTACACATCAATTTAACCAATTTGACTCCACTTTGAACTCAGTA
GTGTCTTCTTCTCATGCTGAACTAATTGGTAAACTAAGCACAGTTTCTAGCTCCTCTCAA
CCGCCATTCAACAATAATAATATTAATACTAATAATTCATGTTACACTACACCGAAATTA
CACATGCCCAATTTGGGAAATTCAGTTCCTTTAAATCCTCCATTGCCTGCTGTCTCTACT
GATCCTGGTTTTGCCCAAAGAGCTGCTAAGTTTTCTTGTTTTGGTAGCCGTAGTTTTAAC
GGTAGAACAAGTCCATTGACACAGAGATCTGCTCAACAATTGGAGAATGGAAAATTGCCT
AGAGTTTCGAGTAGCCCATCCCTGAAGCAAGCTGGATCCCCTTTGCAAACCAAGAATTCG
GGCCAAACAAGGATGGAATTGATGTCTACAAATTTGGGCAGGCCTATCACTAATTCTAAT
GAGTCTGTTTCTGAGCCAAGTGGAGAAACAGGGCCAAAAACTCCAACTGAATTGAATTCT
ACTAGAAAAAGAAAAACAGCTTCAAGCGGGAAAACAGAAGAAGCTGCCCCTGCTAATGGA
AACATGGGTGATGATAATGCAAGAACAAAGCGATGTAAACAAGTAGTAGTAGAAGGTAAT
GAGACAGAAAATGGAACAGTTAACATGGAGGAATCAAAGGGCAATAATGAAGGTGATGAA
ACTCAAAATCAAAAGCCTCCTGAACCACCAAAGGACTATATTCATGTTAGAGCAAGGAGA
GGACAAGCTACTGATAGCCATAGTCTAGCTGAGAGAGTACGACGAGAGAAGATTAGTGAA
AGAATGAAGCTTTTACAAGATCTTGTACCAGGCTGTAATAAGGTAACAGGAAAAGCATTA
ATGCTTGACGAAATTATAAATTATGTACAGTCACTGCAACGACAAGTCGAGTTCCTATCC
ATGAAGTTGGCTTCAGTTAACCCAAGTTTGGATTTTCCAGCAGAGAATCTTCTCCCAAAG
GATATATGTCAACCAAATGGCTCTCTGCCCCAACCTGTTTTCCCAGTAAATTACCAACAA
CCCCGGCAACAACATACTGATATTCCTAATGGGGTACTAAGCCAATGCTCGGCCAACACA
TTAGATAACTCACTGTTTCGCACTCTGGGAATGCAATTGCCTTCCCTAGATGGACTTGGT
GAATATCTTAATCAGTTCCCTACAATGTGCGAGGATGACCTGCAAAGCATTGTGCAGATG
GGATTTAGCCAAAATCCCAACAAGGATCTGACATTGCAGTCACAAAGTTTTCCTGGTAAG
AAAAGAGAGGGCCTCATCAAACGTCTCACATGA

Peptide Sequence

PEP ID

XP_016477459.1
PEP Infomation

PREDICTED: transcription factor bHLH62-like isoform X2 [Nicotiana tabacum]
Sequence

MEKDYFMNGGITNPPLQFEPTMTNWNSLHSGQSSDFFLNPNWDHDSTHQFNQFDSTLNSV
VSSSHAELIGKLSTVSSSSQPPFNNNNINTNNSCYTTPKLHMPNLGNSVPLNPPLPAVST
DPGFAQRAAKFSCFGSRSFNGRTSPLTQRSAQQLENGKLPRVSSSPSLKQAGSPLQTKNS
GQTRMELMSTNLGRPITNSNESVSEPSGETGPKTPTELNSTRKRKTASSGKTEEAAPANG
NMGDDNARTKRCKQVVVEGNETENGTVNMEESKGNNEGDETQNQKPPEPPKDYIHVRARR
GQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS
MKLASVNPSLDFPAENLLPKDICQPNGSLPQPVFPVNYQQPRQQHTDIPNGVLSQCSANT
LDNSLFRTLGMQLPSLDGLGEYLNQFPTMCEDDLQSIVQMGFSQNPNKDLTLQSQSFPGK
KREGLIKRLT

Transcript Sequence

Gene sequence data has not been registered.